Main Page
From BCCD 3.0
Getting Started
Basic Information
- Install Instructions
- User Instructions
- Frequently Asked Questions
- Submitting bug reports
- Submitting feature requests
- Using Bluetooth devices
- Mailing list links
Developer Information
- Development Instructions
- Development FAQ
- Testing the BCCD
- BCCD ISO Testing - Logs
- VirtualBox Test Environment
- Test Log
- Work Log
- Meeting Notes
- SoftwareBuildNotes
- Release Engineering
Configuring and Customizing
Applications and Curricular Components
Built-in MPI Modules:
Additional Modules and Applications:
- Introduction to DNA - This is a great place to start for biological background on using GROMACS and mpiBLAST.
- Proteins and Folding
- About mpiBLAST
- Running mpiBLAST
Tools and Clustering
- Compiling and Running MPI
- Debugging Tools
- Cluster Command Control (C3) tools
- High Performance Linpack (HPL) Benchmark
Articles
- Referencing current, BCCDv3:
- Referencing classic, BCCDv2:
Feedback
Note: This is beta software, and should not even be interpreted as production-quality.
Licensing
The free stuff
BCCDv3, defined as the build, automation, and testing framework and other software contributed by the BCCD developers, is licensed under the GNU General Public License, version 3.
The core of BCCDv3 is based off Debian. All software packaged by Debian must meet the Debian Free Software Guidelines, which include licenses found here.
Some of the stacking filesystem support and hardware autodetection is based off KNOPPIX, which is licensed under the GNU General Public license, version 2.
The stacking filesystem the BCCD uses is AUFS, which is licensed under the GNU General Public license, version 2.
The non-free stuff
The basic software you need to use the BCCD is all freely available. Some of the software (all found in /bccd/software) is licensed solely for use inside the BCCD environment. The software in this category includes but is not limited to:
- intelcc
- dreamm
- mcell
- PSC_DX
The authors of these software packages generously provide free licensing to the BCCD project to further our educational mission, so please be respectful and don't copy this software outside the BCCD.
Explanation
What does all this license legalese mean? In short, the BCCD is free and open-source for all, with the notable exceptions above. You may use it, modify, and redistribute yourself as long as all the license terms remain intact.